7/09/2013

JOURNAL REVIEW June 19 – June 25 (Nature, Science, PNAS, Nature Communications)




NATURE

1. Japan NIH opposed
Nature, 19 June 2013
Scientists in Japan are resisting the government’s plan to form an agency modelled on the US National Institutes of Health (NIH). Japanese government officials would select research fields and manage budgets for projects aimed at boosting health-related science. Last week, seven major bioscience societies circulated an ‘emergency statement’ warning that such an would stifle the creativity and motivation of scientists. Further 54 scientific societies expressed similar concerns.

2. Risk management
Nature 498, 271 (20 June 2013) doi:10.1038/498271a

A project to pool data and tools to calculate earthquake hazards is an important milestone (Global Earthquake Model - GEM), but it will be down to individuals to decide how to interpret and respond to those risks.

3. Salt water fuels nitrogen release
Nature 498, 274 (20 June 2013) doi:10.1038/498274b
Published online 19 June 2013

Saltwater incursions into coastal wetlands can increase the release of ammonium into the ocean, complicating coastal management in the face of human development, climate change and rising sea levels. The potential for saltwater-induced nitrogen release should be assessed during the development of large coastal wetland-restoration projects.

4. Magnetic energy of supernovae
Nature 498, 274 (20 June 2013) doi:10.1038/498274c
Published online 19 June 2013

Light from five super-luminous supernovae has revealed an unusual power source behind these cosmic explosions. The peak luminosity and the long tail of the light are consistent with stars collapsing to form magnetars — rapidly spinning neutron stars with powerful magnetic fields — that provide an additional reservoir of energy for the supernova.

5. Acidic waters do not toughen corals
Nature 498, 274–275 (20 June 2013) doi:10.1038/498274d
Published online 19 June 2013

Even corals that have spent generations in acidic waters have failed to adapt completely to these harsh conditions.
Researchers collected samples of Porites astreoides coral that live in the seas off the Yucatan Peninsula in southeastern Mexico, where groundwater springs have produced low-pH conditions for thousands of years. Despite living in low-pH areas, these reef-forming organisms will not fully adapt to the ocean acidification conditions expected by 2100, say the authors.

6. Early animals' revealing tracks
Nature 498, 275 (20 June 2013) doi:10.1038/498275e
Published online 19 June 2013

Fossilized trails left in 560-million-year-old Canadian rocks may be some of the earliest evidence of squirming animals. The authors identified previously overlooked horizontal and vertical rock trails that seemed to be linked with Aspidella. They suggest that the marks were made as the animals wormed their way out of sediment, rather than as they passively slid.

7. NASA sets sights on the Sun
Alexandra Witze
Nature 498, 279–280 (20 June 2013) doi:10.1038/498279a

On 26 June, NASA plans to launch the US$181-million Interface Region Imaging Spectrograph (IRIS). IRIS mission aims to scrutinize the layer between the star’s surface and its flickering corona. The IRIS telescope will zoom in on the chromosphere.

8. Quark quartet opens fresh vista on matter - First particle containing four quarks is confirmed
Devin Powell
Nature 498, 280–281 (20 June 2013) doi:10.1038/498280a

The BESIII detector in China is one of two experiments to detect four-quark particles.
IHEP. Physicists have resurrected a particle that may have existed in the first hot moments after the Big Bang. Arcanely called Zc(3900), it is the first confirmed particle made of four quarks, the building blocks of much of the Universe’s matter.

9. Archaeology meets primate technology
Andrew Whiten
Nature 498, 303–305 (20 June 2013) doi:10.1038/498303a

A study of wild capuchin monkeys that crack nuts using stone hammers reveals temporal and spatial patterning of the relics of their technological efforts, confirming that such behaviours can be studied from an archaeological perspective.

10. Volcanism on Mars controlled by early oxidation of the upper mantle
J. Tuff, J. Wade & B. J. Wood
Nature 498, 342–345 (20 June 2013) doi:10.1038/nature12225

The compositions of the 3.7-billion-year-old surface rocks on Mars — as observed by the Spirit rover at Gusev crater — are shown to be consistent with early mixing of oxidized surface material into the uppermost Martian mantle: such oxidation appears to have had less influence on more recent volcanic rocks, which are sampled as Martian meteorites.



11. Masses of exotic calcium isotopes pin down nuclear forces
F. Wienholtz, D. Beck, K. Blaum, Ch. Borgmann, M. Breitenfeldt+ et al.
Nature 498, 346–349 (20 June 2013) doi:10.1038/nature12226

The masses of the exotic calcium isotopes 53Ca and 54Ca measured by a multi-reflection time-of-flight method confirm predictions of calculations including nuclear three-body interactions.
See alsoNews & Views by Gade 



12. The importance of feldspar for ice nucleation by mineral dust in mixed-phase clouds
James D. Atkinson, Benjamin J. Murray, Matthew T. Woodhouse, Thomas F. Whale, Kelly J. Baustian, Kenneth S. Carslaw, Steven Dobbie, Daniel O’Sullivan & Tamsin L. Malkin
Nature 498, 355–358 (20 June 2013) doi:10.1038/nature12278

Feldspar minerals are shown to dominate ice nucleation by mineral dust in clouds containing both liquid water and ice particles, despite feldspar being a minor component of
the dust believed to be the main source of ice nuclei.


SCIENCE

13. Monsoon Melee
Jane Qiu
Science 21 June 2013: 1400-1401.[DOI:10.1126/science.340.6139.1400]

Some researchers now contend that heating of the Indo-Gangetic Plain, rather than Tibet, drives the monsoon, with the Himalayas creating a barrier that blocks cold, dry winds from the north. How the matter is resolved could affect how scientists predict the start date and duration of the monsoon, as well as how it will respond to climate change.

14. Pliocene Warmth, Polar Amplification, and Stepped Pleistocene Cooling Recorded in NE Arctic Russia
Julie Brigham-Grette, Martin Melles, Pavel Minyuk, Andrei Andreev, Pavel Tarasov, Robert DeConto, Sebastian Koenig, Norbert Nowaczyk, Volker Wennrich, Peter Rosén, Eeva Haltia, Tim Cook, Catalina Gebhardt, Carsten Meyer-Jacob, Jeff Snyder, and Ulrike Herzschuh
Science 21 June 2013: Vol. 340 no. 6139 pp. 1421-1427, DOI: 10.1126/science.1233137

Evidence from Lake El’gygytgyn, shows that 3.6 to 3.4 million years ago, summer temperatures were ~8°C warmer than today. Multiproxy evidence suggests extreme warmth and polar amplification during the middle Pliocene, sudden stepped cooling events during the Pliocene-Pleistocene transition, and warmer than present Arctic summers until ~2.2 million years ago. Our data are consistent with sea-level records and other proxies indicating that Arctic cooling was insufficient to support large-scale ice sheets until the early Pleistocene.

15. Direct Imaging of Covalent Bond Structure in Single-Molecule Chemical Reactions
Dimas G. de Oteyza, Patrick Gorman, Yen-Chia Chen, Sebastian Wickenburg, Alexander Riss, Duncan J. Mowbray, Grisha Etkin, Zahra Pedramrazi, Hsin-Zon Tsai, Angel Rubio, Michael F. Crommie, and Felix R. Fischer
Science 21 June 2013: 1434-1437, [DOI:10.1126/science.1238187]

A molecule is imaged at atomic resolution as it undergoes a chemical reaction.
Noncontact atomic force microscopy imaged the bond structure of an adsorbed organic reactant and its cyclization products.

16. GWAS of 126,559 Individuals Identifies Genetic Variants Associated with Educational Attainment
Cornelius A. Rietveld, Sarah E. Medland, Jaime Derringer, Jian Yang, Tõnu Esko et al.
Science 21 June 2013: 1467-1471, [DOI:10.1126/science.1235488]

Three genetic loci are found to explain variation associated with educational achievement. These findings can anchor power analyses in social-science genetics


PNAS

17. Evidence for reactive reduced phosphorus species in the early Archean ocean
Matthew A. Pasek, Jelte P. Harnmeijer, Roger Buick, Maheen Gull, and Zachary Atlas
PNAS 2013 110 (25) 10089-10094; published ahead of print June 3, 2013, doi:10.1073/pnas.1303904110

The authrors report the occurrence of dissolvable phosphorous species in Archean allowing synthesis of RNA and other organophosphates necessary for early life.

18. Direct electrolytic dissolution of silicate minerals for air CO2 mitigation and carbon-negative H2 production
Greg H. Rau, Susan A. Carroll, William L. Bourcier, Michael J. Singleton, Megan M. Smith, and Roger D. Aines
PNAS 2013 110 (25) 10095-10100; published ahead of print May 31, 2013, doi:10.1073/pnas.1222358110

Experimental demonstration of coupling of silicate mineral dissolution with saline water electrolysis and H2 production to effect significant air CO2 absorption, chemical conversion, and storage in solution.  The authors propose high-capacity, energy-efficient and inexpensive removal of excess air CO2 with production of carbon-negative H2. The produced hydroxide and/or (bi)carbonate could be useful in reducing sea-to-air CO2 emissions and in neutralizing or offsetting the effects of ongoing ocean acidification.

29. Iron traps terrestrially derived dissolved organic matter at redox interfaces
Thomas Riedel, Dominik Zak, Harald Biester, and Thorsten Dittmar
PNAS 2013 110 (25) 10101-10105; published ahead of print June 3, 2013, doi:10.1073/pnas.1221487110

At redox interfaces in peatlands, where the biogeochemical cycles of iron and dissolved organic matter (DOM) are coupled, this issue can readily be studied. The  precipitation of iron hydroxides at the oxic surface layer of two rewetted fens removed a large fraction of dissolved organic matter. They propose that redox interfaces, which are ubiquitous in marine and terrestrial settings, are selective yet intermediate barriers that limit the flux of land-derived DOM to oceanic waters.

20. Laser-induced plasma cloud interaction and ice multiplication under cirrus cloud conditions
Thomas Leisner, Denis Duft, Ottmar Möhler, Harald Saathoff, Martin Schnaiter, Stefano Henin, Kamil Stelmaszczyk, Massimo Petrarca, Raphaëlle Delagrange, Zuoqiang Hao, Johannes Lüder, Yannick Petit, Philipp Rohwetter, Jérôme Kasparian, Jean-Pierre Wolf, and Ludger Wöste
PNAS 2013 110 (25) 10106-10110; published ahead of print June 3, 2013, doi:10.1073/pnas.1222190110

The authors report on the interaction of laser-generated plasma channels with water and ice clouds observed in a large cloud simulation chamber. No direct influence of the plasma channels on ice formation or precipitation processes could be detected. The plasma channels induced a surprisingly strong effect of ice multiplication.
The findings might open new perspectives for remote sensing of water vapor and ice in the upper troposphere. 


NATURE COMMUNICATION

21. Upper mantle viscosity and dynamic subsidence of curved continental margins
Victor Sacek & Naomi Ussami
Nature Communications 4, Article number: 2036 doi:10.1038/ncomms3036

Modeling shows that curvature of rifting along the continental margin controls post-rift basin subsidence. Viscosity has a high influence on this effect.

22. Exceptionally well-preserved Cretaceous microfossils reveal new biomineralization styles
Jens E. Wendler & Paul Bown
Nature Communications 4, Article number: 2052 doi:10.1038/ncomms3052

Discovery of a new tipe of biomineralization of Cretaceous calcareous microplankton.

23. An earthquake gap south of Istanbul
Marco Bohnhoff, Fatih Bulut, Georg Dresen, Peter E. Malin, Tuna Eken & Mustafa Aktar
Nature Communications 4, Article number: 1999 doi:10.1038/ncomms2999

Analysis of an aseismic area south of Istanbul that is a potential nucleation site for a significant earthquake. A major earthquake could have a disastrous effect due to the proximity of the area to the  aprox.13-milon city (Istanbul).