10/29/2013

JOURNAL REVIEW October 22 – October 28 (Nature, Science, PNAS, Geology, Nature Communications)



NATURE

1. Robust twenty-first-century projections of ElNiño and related precipitation variability
Scott Power, François Delage, Christine Chung, Greg Kociuba & Kevin Keay
Nature 502, 541–545 (24 October 2013) doi:10.1038/nature12580
Received 05 April 2013 Accepted 16 August 2013 Published online 13 October 2013

The future of El Niño and its impact on precipitation in a warming world is clearer than previously appreciated.


SCIENCE

2.  Who's Afraid of Peer Review?
John Bohannon
Science 4 October 2013: Vol. 342 no. 6154 pp. 60-65, DOI: 10.1126/science.342.6154.60

More than 50% of scientific journals accepted a paper based on experiments that are so hopelessly flawed that the results are meaningless.

3. Ancient DNA Links Native Americans With Europe
Michael Balter
Science 25 October 2013: Vol. 342 no. 6157 pp. 409-410

The genome of a Siberian boy who died 24,000 years ago offers clues to the identity of the people who first settled the Americas. But the boy apparently descended from people who had lived in Europe or western Asia.

4. The New Core Paradox
Peter Olson
Science 25 October 2013: 431-432.[DOI:10.1126/science.1243477]

Recent results show that Earth's core has a large thermal conductivity, raising questions over how the geodynamo evolved.

5. Biodiversity Risks from Fossil Fuel Extraction
N. Butt, H. L. Beyer, J. R. Bennett, D. Biggs, R. Maggini, M. Mills, A. R. Renwick, L. M. Seabrook, and H. P. Possingham
Science 25 October 2013: 425-426.

6. Mass-Independent Oxygen Isotopic Partitioning During Gas-Phase SiO2 Formation
Subrata Chakraborty, Petia Yanchulova, and Mark H. Thiemens
Science 25 October 2013: 463-466.[DOI:10.1126/science.1242237]

7. Strong Premelting Effect in the Elastic Properties of hcp-Fe Under Inner-Core Conditions
Benjamí Martorell, Lidunka Vočadlo, John Brodholt, and Ian G. Wood
Science 25 October 2013: 466-468.
Published online 10 October 2013 [DOI:10.1126/science.1243651]

The observed shear-wave velocity VS in Earth’s core is much lower than expected from mineralogical models derived from both calculations and experiments. Elastic weakening of iron just before melting explains variations in the seismic structure of Earth’s inner core.

8. 2000 Years of Parallel Societies in Stone Age Central Europe
Ruth Bollongino, Olaf Nehlich, Michael P. Richards, Jörg Orschiedt, Mark G. Thomas, Christian Sell, Zuzana Fajkošová, Adam Powell, and Joachim Burger
Science 25 October 2013: 479-481.
Published online 10 October 2013 [DOI:10.1126/science.1245049]

Genetic and isotopic evidence document changes occurring in Europe during the Neolithic era.


PNAS

9. Holocene dynamics of the Florida Everglades with respect to climate, dustfall, and tropical storms
Paul H. Glaser, Barbara C. S. Hansen, Joe J. Donovan, Thomas J. Givnish, Craig A. Stricker, and John C. Volin
PNAS 2013 110 (43) 17211-17216; published ahead of print October 7, 2013, doi:10.1073/pnas.1222239110

A multiproxy sedimentary record indicates that changes in atmospheric circulation patterns produced an abrupt shift in the hydrology and dust deposition in South Florida wetlands over the past 4,600 y.

10. Molecular understanding of atmospheric particle formation from sulfuric acid and large oxidized organic molecules
Siegfried Schobesberger, Heikki Junninen, Federico Bianchi, Gustaf Lönn, Mikael Ehn, Katrianne Lehtipalo, Josef Dommen, Sebastian Ehrhart, Ismael K. Ortega, Alessandro Franchin, Tuomo Nieminen, Francesco Riccobono, Manuel Hutterli, Jonathan Duplissy, João Almeida, Antonio Amorim, Martin Breitenlechner, Andrew J. Downard, Eimear M. Dunne, Richard C. Flagan, Maija Kajos, Helmi Keskinen, Jasper Kirkby, Agnieszka Kupc, Andreas Kürten, Theo Kurtén, Ari Laaksonen, Serge Mathot, Antti Onnela, Arnaud P. Praplan, Linda Rondo, Filipe D. Santos, Simon Schallhart, Ralf Schnitzhofer, Mikko Sipilä, António Tomé, Georgios Tsagkogeorgas, Hanna Vehkamäki, Daniela Wimmer, Urs Baltensperger, Kenneth S. Carslaw, Joachim Curtius, Armin Hansel, Tuukka Petäjä, Markku Kulmala, Neil M. Donahue, and Douglas R. Worsnop
PNAS 2013 110 (43) 17223-17228; published ahead of print October 7, 2013, doi:10.1073/pnas.1306973110

Atmospheric aerosols formed by nucleation of vapors affect radiative forcing and therefore climate. Here, we present high-resolution mass spectra of ion clusters observed during new particle formation experiments.

11. Delayed detection of climate mitigation benefits due to climate inertia and variability
Claudia Tebaldi and Pierre Friedlingstein
PNAS 2013 110 (43) 17229-17234; published ahead of print October 7, 2013, doi:10.1073/pnas.1300005110 


Because of the inertia and internal variability affecting the climate system and the global carbon cycle, it is unlikely that a reduction in warming would be immediately discernible. Here we use 21st century simulations from the latest ensemble of Earth System Model experiments to investigate and quantify when mitigation becomes clearly discernible. 

12. Human and natural influences on the changing thermal structure of the atmosphere
Benjamin D. Santer, Jeffrey F. Painter, Céline Bonfils, Carl A. Mears, Susan Solomon, Tom M. L. Wigley, Peter J. Gleckler, Gavin A. Schmidt, Charles Doutriaux, Nathan P. Gillett, Karl E. Taylor, Peter W. Thorne, and Frank J. Wentz
PNAS 2013 110 (43) 17235-17240; published ahead of print September 16, 2013, doi:10.1073/pnas.1305332110

Here, we present evidence that a human-caused signal can also be identified relative to the larger “total” natural variability arising from sources internal to the climate system, solar irradiance changes, and volcanic forcing.

13. Vegetation controls on the maximum size of coastal dunes
Orencio Durán and Laura J. Moore
PNAS 2013 110 (43) 17217-17222; published ahead of print October 7, 2013, doi:10.1073/pnas.1307580110

Here, we study foredune development using an ecomorphodynamic model that resolves the coevolution of topography and vegetation in response to both physical and ecological factors. We find that foredune growth is eventually limited by a negative feedback between wind flow and topography.

14. Changes in ecosystem resilience detected in automated measures of ecosystem metabolism during a whole-lake manipulation
Ryan D. Batt, Stephen R. Carpenter, Jonathan J. Cole, Michael L. Pace, and Robert A. Johnson
PNAS 2013 110 (43) 17398-17403; published ahead of print October 7, 2013, doi:10.1073/pnas.1316721110

We examined the capacity of environmental sensors to assess resilience during an experimentally induced transition in a whole-lake manipulation. A trophic cascade was induced in a planktivore-dominated lake by slowly adding piscivorous bass, whereas a nearby bass-dominated lake remained unmanipulated and served as a reference ecosystem during the 4-y experiment.

15. Sleep spindles in midday naps enhance learning in preschool children
Laura Kurdziel, Kasey Duclos, and Rebecca M. C. Spencer
PNAS 2013 110 (43) 17267-17272; published ahead of print September 23, 2013, doi:10.1073/pnas.1306418110

Given that sleep benefits memory in young adults, it is possible that naps serve a similar function for young children. Here we show evidence that classroom naps support learning in preschool children by enhancing memories acquired earlier in the day compared with equivalent intervals spent awake.


GEOLOGY

16. Localized tsunamigenic earthquakes inferred from preferential distribution of coastal boulders on the Ryukyu Islands, Japan
Kazuhisa Goto, Kunimasa Miyagi, and Fumihiko Imamura
Geology, November 2013, v. 41, p. 1139-1142, first published on September 6, 2013, doi:10.1130/G34823.1

The occurrence of large earthquakes and tsunamis along the Ryukyu Trench is a subject of continuing interest, the key to which is the long-term geological record. Here we describe the clast size and spatial distributions of 2900 boulders on the reefs of the Ryukyu Islands, Japan, as markers of paleotsunamis and causative tsunamigenic earthquakes.

17. Multidecadal rainfall variability in South Pacific Convergence Zone as revealed by stalagmite geochemistry
J.W. Partin, T.M. Quinn, C-C Shen, J. Emile-Geay, F.W. Taylor, C.R. Maupin, K. Lin, C.S. Jackson, J.L. Banner, D.J. Sinclair, and C.-A. Huh
Geology, November 2013, v. 41, p. 1143-1146, first published on September 6, 2013, doi:10.1130/G34718.1

Here we present an absolutely dated, subannually resolved, 446 yr stable oxygen isotope (δ18O) cave record of rainfall variability in Vanuatu (southern Pacific Ocean). The δ18O-based proxy rainfall record is dominated by changes in stalagmite δ18O that are large (1‰), quasi-periodic (50 yr period), and generally abrupt (within 5–10 yr).

18. Iron formation carbonates: Paleoceanographic proxy or recorder of microbial diagenesis?
Clark M. Johnson, James M. Ludois, Brian L. Beard, Nicolas J. Beukes, and Adriana Heimann
Geology, November 2013, v. 41, p. 1147-1150, first published on September 6, 2013, doi:10.1130/G34698.1

The chemical and isotopic compositions of carbonates are commonly used as proxies for ancient seawater or paleoenvironments. Here were use an isotope tracer that is not affected by biological processes or isotopic fractionation, the radiogenic 87Rb-87Sr system, to test the applicability of iron fromation (IF) carbonates as a paleoenvironmental proxy. These results question the use of IF carbonates to infer seawater compositions and paleoenvironmental conditions, including estimates for atmospheric CO2 contents.

19. Estuaries beneath ice sheets
Huw J. Horgan, Richard B. Alley, Knut Christianson, Robert W. Jacobel, Sridhar Anandakrishnan, Atsuhiro Muto, Lucas H. Beem, and Matthew R. Siegfried
Geology, November 2013, v. 41, p. 1159-1162, first published on September 6, 2013, doi:10.1130/G34654.1

Interactions between subglacial hydrology and the ocean make the existence of estuaries at the grounding zones of ice sheets likely. Here we present geophysical observations of an estuary at the downstream end of the hydrologic system that links the active subglacial lakes in Antarctica.

20. Carbon dioxide emission to Earth’s surface by deep-sea volcanism
Satoshi Okumura and Naoto Hirano
Geology, November 2013, v. 41, p. 1167-1170, first published on September 6, 2013, doi:10.1130/G34620.1

Large amounts of CO2 are transferred from Earth’s interior to the surface by volcanism.
Here, we measure the CO2 and H2O contents of glassy basalts produced by petit-spot volcanism. Based on the measured values and magma flux of petit-spot volcanism, we show that the rate of CO2 emission from petit-spot volcanoes contribute to the carbon cycle on Earth more that has been recognized. 

21. Shaping post-orogenic landscapes by climate and chemical weathering
Oliver A. Chadwick, Josh J. Roering, Arjun M. Heimsath, Shaun R. Levick, Gregory P. Asner, and Lesego Khomo
Geology, November 2013, v. 41, p. 1171-1174, first published on September 6, 2013, doi:10.1130/G34721.1

Here, we measure geochemical and geomorphic properties of catchments in Kruger National Park, South Africa, where granitic lithology and erosion rates are invariant, enabling us to evaluate how varying mean annual precipitation impacts hill-valley spacing or landscape dissection. Catchment-averaged erosion rates, based on 10Be concentrations in river sands, are low (3–6 m/m.y.) and vary minimally across the three sites.

22. Rapid high-amplitude variability in Baltic Sea hypoxia during the Holocene
Tom Jilbert and Caroline P. Slomp
Geology, November 2013, v. 41, p. 1183-1186, first published on September 6, 2013, doi:10.1130/G34804.1

Here we present bulk sediment geochemical records from the deep basins of the Baltic Sea that show multicentennial oscillations during intervals of past hypoxia, suggesting rapid alternations between hypoxic and relatively oxic conditions.
The results confirm the role of anthropogenic nutrient loading in driving this system into its current hypoxic state.

23. High-flying diatoms: Widespread dispersal of microorganisms in an explosive volcanic eruption
Alexa R. Van Eaton, Margaret A. Harper, and Colin J.N. Wilson
Geology, November 2013, v. 41, p. 1187-1190, first published on September 6, 2013, doi:10.1130/G34829.1

This study documents abundant freshwater diatoms in widespread tephra from the 25.4 ka Oruanui eruption of Taupo volcano, New Zealand.
Our results suggest that dispersal of microorganisms may be an overlooked feature of a number of ancient and modern eruptions, and indicate a novel pathway of microbe transport in airborne volcanic plumes

24. Abundant bacterial magnetite occurrence in oxic red clay
Toshitsugu Yamazaki and Takaya Shimono
Geology, November 2013, v. 41, p. 1191-1194, first published on September 6, 2013, doi:10.1130/G34782.1

We demonstrate that bacterial magnetites (magnetofossils) dominate magnetic mineral assemblages throughout a 76 m thickness of red clay at IODP site in the South Pacific Gyre, as well as in subsurface red clay of the North Pacific Gyre.

25. Tsunami-generated turbidity current of the 2011 Tohoku-Oki earthquake
Kazuno Arai, Hajime Naruse, Ryo Miura, Kiichiro Kawamura, Ryota Hino, Yoshihiro Ito, Daisuke Inazu, Miwa Yokokawa, Norihiro Izumi, Masafumi Murayama, and Takafumi Kasaya
Geology, November 2013, v. 41, p. 1195-1198, first published on September 6, 2013, doi:10.1130/G34777.1

We show the first real-time record of a turbidity current associated with a great earthquake, the Tohoku-Oki earthquake offshore Japan. Our discovery can be a starting point for more detailed characterization of modern tsunamigenic turbidites, and for the identification of tsunamigenic turbidites in geologic records.can live at decimeter depths within red clay.
NATURE COMMUNICATIONS

26. Sequestration of Martian CO2 by mineral carbonation
Tim Tomkinson, Martin R. Lee, Darren F. Mark & Caroline L. Smith
Nature Communications 4, Article number: 2662 doi:10.1038/ncomms3662
Received 11 June 2013 Accepted 24 September 2013 Published 22 October 2013

Carbonation is the water-mediated replacement of silicate minerals, such as olivine, by carbonate, and is commonplace in the Earth’s crust. This reaction can remove significant quantities of CO2 from the atmosphere and store it over geological timescales. Here we present the first direct evidence for CO2 sequestration and storage on Mars by mineral carbonation.